Chimpanzee VS Human
Rat VS Mouse
Sheep VS Cow
A. lyrata VS A. thaliana
Vine VS Poplar
Brassica rapa VS itself
Few repeats option on Pacific oyster: cgigas_uk_roslin_v1 vs ASM1103280v1
Some repeats option on Pacific oyster: cgigas_uk_roslin_v1 vs ASM1103280v1
Many repeats option on Pacific oyster: cgigas_uk_roslin_v1 vs ASM1103280v1
| Reference genome | Query genome | Time elapsed | Maximum RAM usage |
|---|---|---|---|
| Human | Chimpanzee | 1 h 7 min 14 s | 34.1 GiB |
| Mouse | Rat | 39 min 54 s | 22.8 GiB |
| Cow | Sheep | 43 min 3 s | 25.8 GiB |
| A. thaliana | A. lyrata | 1 min 4 s | 2.1 GiB |
| Poplar | Vine | 3 min 21 s | 7.3 GiB |
| Brassica rapa | Brassica rapa | 2 min 52 s | 8.3 GiB |
| Pacific oyster cgigas_uk_roslin_v1 | Pacific oyster ASM1103280v1 (few repeats) | 21 min 29 s | 26.1 GiB |
| Pacific oyster cgigas_uk_roslin_v1 | Pacific oyster ASM1103280v1 (some repeats) | 5 min 35 s | 11.6 GiB |
| Pacific oyster cgigas_uk_roslin_v1 | Pacific oyster ASM1103280v1 (many repeats) | 3 min 17 s | 7.5 GiB |