# An align job
type=align id_job=example_align tool=minimap2 options=repeat:many query=example://Fusarium_culmorum.EF1.dna.toplevel.fa.gz target=example://Fusarium_graminearum.RR1.dna.toplevel.fa.gz

# An all versus all align job
type=align id_job=example_align_ava tool=minimap2 options=repeat:many target=example://Fusarium_graminearum.RR1.dna.toplevel.fa.gz

# A plot job
type=plot id_job=example_plot backup=example://backup.tar.gz